cancer expression dataset illustrating biological heterogeneity and batch effects. The panel stores a small set of high-variance probe sets together with pathology and batch annotations for interpretation."> Skip to contents

A compact omics table derived from bladderbatch::bladderEset, a bladder cancer expression dataset illustrating biological heterogeneity and batch effects. The panel stores a small set of high-variance probe sets together with pathology and batch annotations for interpretation.

Usage

bladder_gene_panel

Format

A data frame with 57 rows and 12 variables:

sample_id

Sample identifier.

202917_s_at

Expression value.

217022_s_at

Expression value.

207935_s_at

Expression value.

211430_s_at

Expression value.

202409_at

Expression value.

205916_at

Expression value.

214677_x_at

Expression value.

212768_s_at

Expression value.

outcome

Observed pathology annotation.

batch

Observed processing batch.

cancer

Observed coarse cancer status.

Source

Derived from the Bioconductor experiment package bladderbatch.